STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKP47366.1Mobile element protein. (525 aa)    
Predicted Functional Partners:
AKP47367.1
Mobile element protein.
 
     0.905
AKP47368.1
Hypothetical protein.
 
     0.837
AKP45776.1
Mobile element protein.
 
     0.782
AKP47171.1
Mobile element protein.
 
     0.777
AKP48399.1
Mobile element protein.
 
     0.777
AKP48550.1
Mobile element protein.
 
     0.777
AKP47170.1
Hypothetical protein.
 
     0.618
AKP48400.1
Hypothetical protein.
 
     0.618
AKP48549.1
Hypothetical protein.
 
     0.618
Your Current Organism:
Bacillus smithii
NCBI taxonomy Id: 1479
Other names: B. smithii, CCUG 27413, CIP 103790, DSM 4216, IFO 15311, JCM 9076, LMG 12526, LMG:12526, NBRC 15311, NRRL NRS-173
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.