STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKP47786.1Late competence protein ComGBaccess of DNA to ComEA. (322 aa)    
Predicted Functional Partners:
AKP47787.1
Late competence protein ComGAaccess of DNA to ComEA.
 
 
 0.989
AKP47785.1
Late competence protein ComGCaccess of DNA to ComEA; Required for transformation and DNA binding.
 
  
 0.943
AKP48264.1
N-methyltransferase; Leader peptidase.
 
  
 0.887
AKP47782.1
Late competence protein ComGFaccess of DNA to ComEA; FIG012620.
 
  
 0.878
AKP47784.1
Late competence protein ComGDaccess of DNA to ComEA; FIG012777.
 
  
 0.754
AKP47879.1
Late competence protein ComEC DNA transport.
 
  
 0.730
AKP48265.1
Type IV pilin PilA.
 
  
 0.705
AKP47881.1
Late competence protein ComEA DNA receptor.
  
  
 0.668
AKP48262.1
Type IV pilus biogenesis protein PilO.
 
 
 
 0.589
AKP47783.1
Hypothetical protein.
       0.566
Your Current Organism:
Bacillus smithii
NCBI taxonomy Id: 1479
Other names: B. smithii, CCUG 27413, CIP 103790, DSM 4216, IFO 15311, JCM 9076, LMG 12526, LMG:12526, NBRC 15311, NRRL NRS-173
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