STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKP47789.1Hypothetical protein; FIG00673235. (80 aa)    
Predicted Functional Partners:
AKP46735.1
Phenylalanyl-tRNA synthetase alpha subunit.
  
    0.781
AKP47834.1
Membrane-attached cytochrome c550.
  
    0.779
AKP45566.1
KinB signaling pathway activation protein.
  
     0.774
AKP46167.1
Hypothetical protein.
  
     0.774
AKP46732.1
CtaG protein.
  
     0.774
AKP47223.1
YoxJ.
  
     0.774
AKP47589.1
ABC transporter periplasmic binding protein yphF.
  
     0.774
AKP47733.1
Hypothetical protein; FIG01225754.
  
     0.774
AKP48278.1
Hypothetical protein; FIG01225718.
  
     0.774
AKP47566.1
Menaquinone-cytochrome C oxidoreductasecytochrome C subunit; Component of the menaquinol-cytochrome c reductase complex.
  
     0.773
Your Current Organism:
Bacillus smithii
NCBI taxonomy Id: 1479
Other names: B. smithii, CCUG 27413, CIP 103790, DSM 4216, IFO 15311, JCM 9076, LMG 12526, LMG:12526, NBRC 15311, NRRL NRS-173
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.