STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKP47811.1Hypothetical protein. (124 aa)    
Predicted Functional Partners:
AKP47812.1
Hypothetical protein.
 
  
 0.966
AKP48169.1
Hypothetical protein; FIG01233842.
  
     0.739
AKP47899.1
Hypothetical protein.
  
     0.722
AKP46890.1
Hypothetical protein.
  
     0.704
AKP45831.1
Negative regulator of flagellin synthesis.
  
     0.689
AKP46045.1
Competence transcription factor.
  
     0.687
AKP46421.1
YjbH-likeGTP pyrophosphokinase domain.
  
     0.663
AKP46331.1
Competence transcription factor.
  
     0.657
AKP47570.1
Hypothetical protein; Belongs to the UPF0302 family.
  
     0.648
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
  
     0.603
Your Current Organism:
Bacillus smithii
NCBI taxonomy Id: 1479
Other names: B. smithii, CCUG 27413, CIP 103790, DSM 4216, IFO 15311, JCM 9076, LMG 12526, LMG:12526, NBRC 15311, NRRL NRS-173
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.