STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKP48458.1Hypothetical protein; Belongs to the arginase family. (258 aa)    
Predicted Functional Partners:
AKP47765.1
Hypothetical protein; FIG00672904.
  
    0.561
AKP47998.1
Hypothetical protein; FIG00673051.
  
     0.500
AKP46087.1
5,10-methylenetetrahydrofolate reductase; Homocysteine S-methyltransferase.
  
  
 0.487
AKP48457.1
Small acid soluble protein.
       0.481
argD
Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
 
 0.453
AKP48761.1
Lantibiotic ABC transporter.
  
     0.451
AKP48762.1
Lantibiotic ABC transporter.
  
     0.446
AKP48768.1
Subtilin biosynthesis sensor protein spaK.
  
   
 0.426
Your Current Organism:
Bacillus smithii
NCBI taxonomy Id: 1479
Other names: B. smithii, CCUG 27413, CIP 103790, DSM 4216, IFO 15311, JCM 9076, LMG 12526, LMG:12526, NBRC 15311, NRRL NRS-173
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.