STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744995_00378Unannotated protein. (289 aa)    
Predicted Functional Partners:
GCA_000744995_00377
Unannotated protein.
 
     0.855
GCA_000744995_00380
Unannotated protein.
 
  
  0.847
GCA_000744995_00379
Unannotated protein.
 
     0.754
GCA_000744995_01742
Unannotated protein.
  
  
  0.748
GCA_000744995_00376
Unannotated protein.
 
     0.723
GCA_000744995_00375
Unannotated protein.
 
     0.712
GCA_000744995_00970
Unannotated protein.
 
  
  0.670
GCA_000744995_00381
Unannotated protein.
     0.616
GCA_000744995_00011
Unannotated protein.
    
   0.471
GCA_000744995_01064
Unannotated protein.
    
 
 0.456
Your Current Organism:
Oceanicaulis sp. HL87
NCBI taxonomy Id: 1479238
Other names: O. sp. HL-87, Oceanicaulis sp. HL-87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.