STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744895_01159Unannotated protein. (581 aa)    
Predicted Functional Partners:
GCA_000744895_01157
Unannotated protein.
 
     0.659
GCA_000744895_01158
Unannotated protein.
 
     0.651
GCA_000744895_01160
Unannotated protein.
       0.560
GCA_000744895_01156
Unannotated protein.
       0.509
GCA_000744895_00017
Unannotated protein.
 
 
   0.482
HLUCCX21_00570
Unannotated protein.
  
   
 0.466
HLUCCX21_03500
Unannotated protein.
 
 
   0.449
GCA_000744895_01539
Unannotated protein.
   
  
 0.420
Your Current Organism:
Porphyrobacter sp. HL46
NCBI taxonomy Id: 1479239
Other names: P. sp. HL-46, Porphyrobacter sp. HL-46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.