STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCW58306.1Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa)    
Predicted Functional Partners:
OCW58330.1
DDE endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.948
OCW59637.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.780
OCW56838.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.778
OCW59626.1
Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.473
OCW58307.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.435
OCW56860.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.408
Your Current Organism:
Hoeflea olei
NCBI taxonomy Id: 1480615
Other names: H. olei, Hoeflea olei Rahul et al. 2015, Hoeflea sp. JC234, KCTC 42071, LMG 28200, LMG:28200, strain JC234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.