STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002105285_02892Unannotated protein. (237 aa)    
Predicted Functional Partners:
GCA_002105285_02891
Unannotated protein.
 
 
 0.997
GCA_002105285_02890
Unannotated protein.
 
 
  0.993
GCA_002105285_02795
Unannotated protein.
  
  
 
0.775
GCA_002105285_00554
Unannotated protein.
  
 
 0.757
GCA_002105285_01496
Unannotated protein.
  
  
 
0.695
GCA_002105285_03374
Unannotated protein.
  
  
 
0.688
GCA_002105285_01259
Unannotated protein.
  
  
 
0.659
GCA_002105285_02819
Unannotated protein.
  
  
 
0.651
GCA_002105285_03689
Unannotated protein.
  
  
 
0.645
GCA_002105285_00109
Unannotated protein.
  
  
 
0.637
Your Current Organism:
Planktotalea arctica
NCBI taxonomy Id: 1481893
Other names: KACC 18009, NBRC 110393, P. arctica, Planktotalea arctica Baek et al. 2017, Planktotalea sp. IMCC9565, strain IMCC9565
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.