STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002105285_03271Unannotated protein. (628 aa)    
Predicted Functional Partners:
GCA_002105285_03276
Unannotated protein.
 
  
 0.990
GCA_002105285_03272
Unannotated protein.
 
  
  0.979
GCA_002105285_02643
Unannotated protein.
 
 
 0.910
GCA_002105285_03275
Unannotated protein.
 
  
  0.905
GCA_002105285_03277
Unannotated protein.
 
  
  0.905
GCA_002105285_03274
Unannotated protein.
 
     0.883
GCA_002105285_00857
Unannotated protein.
 
 
 0.882
GCA_002105285_03273
Unannotated protein.
 
     0.878
GCA_002105285_03279
Unannotated protein.
 
   
 0.874
GCA_002105285_03278
Unannotated protein.
 
    0.860
Your Current Organism:
Planktotalea arctica
NCBI taxonomy Id: 1481893
Other names: KACC 18009, NBRC 110393, P. arctica, Planktotalea arctica Baek et al. 2017, Planktotalea sp. IMCC9565, strain IMCC9565
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.