STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAM74669.1Hypothetical protein. (317 aa)    
Predicted Functional Partners:
GAM74668.1
Hypothetical protein.
     0.869
GAM75209.1
Hypothetical protein.
 
  
  0.742
GAM74667.1
Nickel-binding accessory protein ureJ-hupE.
       0.601
GAM74666.1
Hypothetical protein.
       0.529
GAM75955.1
Bll1368 protein.
  
  
  0.523
folE
GTP cyclohydrolase I type 1.
    
 0.487
folE-2
GTP cyclohydrolase I type 1.
    
 0.487
GAM73848.1
Hypothetical protein.
  
     0.483
GAM73996.1
Dihydroneopterin triphosphate epimerase.
     
 0.468
GAM76942.1
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.468
Your Current Organism:
Vibrio ishigakensis
NCBI taxonomy Id: 1481914
Other names: JCM 19231, LMG 28703, LMG:28703, V. ishigakensis, Vibrio ishigakensis Gao et al. 2018, Vibrio sp. C1(2016), Vibrio sp. C212, Vibrio sp. C216, Vibrio sp. C5(2016), Vibrio sp. C64, Vibrio sp. JCM 19231, Vibrio sp. JCM 19232, Vibrio sp. JCM 19241, strain c1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.