Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAM73976.1 | GAM73978.1 | JCM19241_5172 | JCM19241_5174 | Hypothetical membrane protein. | Potassium channel protein. | 0.860 |
GAM73976.1 | GAM76512.1 | JCM19241_5172 | JCM19241_4049 | Hypothetical membrane protein. | Permease. | 0.773 |
GAM73976.1 | gltS | JCM19241_5172 | JCM19241_1196 | Hypothetical membrane protein. | Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family. | 0.513 |
GAM73978.1 | GAM73976.1 | JCM19241_5174 | JCM19241_5172 | Potassium channel protein. | Hypothetical membrane protein. | 0.860 |
GAM73978.1 | GAM76512.1 | JCM19241_5174 | JCM19241_4049 | Potassium channel protein. | Permease. | 0.571 |
GAM73978.1 | gltS | JCM19241_5174 | JCM19241_1196 | Potassium channel protein. | Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family. | 0.404 |
GAM74851.1 | GAM74852.1 | JCM19241_1194 | JCM19241_1195 | Transcriptional regulator. | Hypothetical protein. | 0.934 |
GAM74851.1 | gltS | JCM19241_1194 | JCM19241_1196 | Transcriptional regulator. | Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family. | 0.440 |
GAM74852.1 | GAM74851.1 | JCM19241_1195 | JCM19241_1194 | Hypothetical protein. | Transcriptional regulator. | 0.934 |
GAM74852.1 | gltS | JCM19241_1195 | JCM19241_1196 | Hypothetical protein. | Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family. | 0.440 |
GAM74985.1 | GAM74986.1 | JCM19241_1328 | JCM19241_1329 | Tellurite resistance protein. | Tellurite resistance protein. | 0.945 |
GAM74985.1 | gltS | JCM19241_1328 | JCM19241_1196 | Tellurite resistance protein. | Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family. | 0.415 |
GAM74986.1 | GAM74985.1 | JCM19241_1329 | JCM19241_1328 | Tellurite resistance protein. | Tellurite resistance protein. | 0.945 |
GAM74986.1 | gltS | JCM19241_1329 | JCM19241_1196 | Tellurite resistance protein. | Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family. | 0.476 |
GAM76512.1 | GAM73976.1 | JCM19241_4049 | JCM19241_5172 | Permease. | Hypothetical membrane protein. | 0.773 |
GAM76512.1 | GAM73978.1 | JCM19241_4049 | JCM19241_5174 | Permease. | Potassium channel protein. | 0.571 |
GAM76512.1 | gltS | JCM19241_4049 | JCM19241_1196 | Permease. | Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family. | 0.460 |
GAM78440.1 | gltS | JCM19241_3778 | JCM19241_1196 | Tellurite resistance protein. | Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family. | 0.429 |
gltS | GAM73976.1 | JCM19241_1196 | JCM19241_5172 | Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family. | Hypothetical membrane protein. | 0.513 |
gltS | GAM73978.1 | JCM19241_1196 | JCM19241_5174 | Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family. | Potassium channel protein. | 0.404 |
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