STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAM77253.1Putative two-domain glycosyltransferase. (260 aa)    
Predicted Functional Partners:
GAM77252.1
ADP-heptose-lipooligosaccharide heptosyltransferase II.
 
  
 0.811
GAM77251.1
O-antigen ligase.
  
  
 0.710
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.631
GAM77452.1
UTP-glucose-1-phosphate uridylyltransferase.
 
  
 0.602
GAM74246.1
Glycosyltransferase sypH.
 
 
 0.600
GAM77255.1
Poly(glycerol-phosphate) alpha-glucosyltransferase.
  
 
 0.596
GAM76109.1
Urate oxidase.
  
 
 0.570
GAM76110.1
Urate oxidase.
  
 
 0.570
GAM77256.1
Poly(glycerol-phosphate) alpha-glucosyltransferase.
  
 
 0.539
hisB
Histidinol-phosphatase; In the N-terminal section; belongs to the histidinol- phosphatase family.
   
 0.489
Your Current Organism:
Vibrio ishigakensis
NCBI taxonomy Id: 1481914
Other names: JCM 19231, LMG 28703, LMG:28703, V. ishigakensis, Vibrio ishigakensis Gao et al. 2018, Vibrio sp. C1(2016), Vibrio sp. C212, Vibrio sp. C216, Vibrio sp. C5(2016), Vibrio sp. C64, Vibrio sp. JCM 19231, Vibrio sp. JCM 19232, Vibrio sp. JCM 19241, strain c1
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