STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smgHypothetical protein; Belongs to the Smg family. (157 aa)    
Predicted Functional Partners:
GAM78599.1
Rossmann fold nucleotide-binding protein Smf.
     
 0.808
GAM77529.1
Cytosol aminopeptidase pepA.
  
     0.730
GAM78863.1
Hypothetical protein.
  
     0.715
GAM73095.1
Glycine cleavage system transcriptional antiactivator gcvR.
  
    0.714
zapD
Hypothetical protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.
  
     0.710
GAM78601.1
Similar to C-terminal Zn-finger domain of DNA topoisomerase I.
 
   
 0.709
GAM73211.1
Starvation lipoprotein slp paralog.
  
     0.636
GAM76933.1
DNA primase.
  
     0.634
GAM77483.1
Possible exported protein.
  
     0.631
GAM77820.1
Peptidyl-prolyl cis-trans isomerase ppiD.
  
     0.583
Your Current Organism:
Vibrio ishigakensis
NCBI taxonomy Id: 1481914
Other names: JCM 19231, LMG 28703, LMG:28703, V. ishigakensis, Vibrio ishigakensis Gao et al. 2018, Vibrio sp. C1(2016), Vibrio sp. C212, Vibrio sp. C216, Vibrio sp. C5(2016), Vibrio sp. C64, Vibrio sp. JCM 19231, Vibrio sp. JCM 19232, Vibrio sp. JCM 19241, strain c1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.