STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAM73348.1Esterase of the alpha-beta hydrolase superfamily. (127 aa)    
Predicted Functional Partners:
GAM73347.1
Esterase of the alpha-beta hydrolase superfamily.
 
     0.918
GAM77376.1
Universal stress protein B.
  
   
 0.759
GAM75929.1
Putative transport protein.
  
     0.749
GAM77708.1
Hypothetical protein.
  
     0.744
GAM74181.1
sgrR protein.
  
     0.737
GAM78418.1
2-dehydropantoate 2-reductase.
 
     0.715
GAM77619.1
DNA recombination and repair protein recO.
  
     0.715
GAM76480.1
Hypothetical protein; Belongs to the UPF0304 family.
  
     0.707
GAM74180.1
sgrR protein.
  
     0.704
GAM73349.1
Esterase of the alpha-beta hydrolase superfamily.
      0.699
Your Current Organism:
Vibrio ishigakensis
NCBI taxonomy Id: 1481914
Other names: JCM 19231, LMG 28703, LMG:28703, V. ishigakensis, Vibrio ishigakensis Gao et al. 2018, Vibrio sp. C1(2016), Vibrio sp. C212, Vibrio sp. C216, Vibrio sp. C5(2016), Vibrio sp. C64, Vibrio sp. JCM 19231, Vibrio sp. JCM 19232, Vibrio sp. JCM 19241, strain c1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.