Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAM72911.1 | GAM73259.1 | JCM19241_2366 | JCM19241_2714 | Transcriptional regulator. | Phosphoenolpyruvate-protein phosphotransferase of PTS system. | 0.886 |
GAM72911.1 | GAM73733.1 | JCM19241_2366 | JCM19241_3188 | Transcriptional regulator. | PTS system. | 0.533 |
GAM72911.1 | GAM73734.1 | JCM19241_2366 | JCM19241_3189 | Transcriptional regulator. | PTS system. | 0.533 |
GAM72911.1 | GAM73735.1 | JCM19241_2366 | JCM19241_3190 | Transcriptional regulator. | Sucrose operon repressor scrR. | 0.761 |
GAM72911.1 | GAM73736.1 | JCM19241_2366 | JCM19241_3191 | Transcriptional regulator. | Sucrose operon repressor scrR. | 0.771 |
GAM72911.1 | GAM75396.1 | JCM19241_2366 | JCM19241_3308 | Transcriptional regulator. | Transcriptional regulator. | 0.773 |
GAM73259.1 | GAM72911.1 | JCM19241_2714 | JCM19241_2366 | Phosphoenolpyruvate-protein phosphotransferase of PTS system. | Transcriptional regulator. | 0.886 |
GAM73259.1 | GAM73561.1 | JCM19241_2714 | JCM19241_3016 | Phosphoenolpyruvate-protein phosphotransferase of PTS system. | Purine nucleotide synthesis repressor. | 0.886 |
GAM73259.1 | GAM73718.1 | JCM19241_2714 | JCM19241_3173 | Phosphoenolpyruvate-protein phosphotransferase of PTS system. | Transcriptional regulator. | 0.886 |
GAM73259.1 | GAM73733.1 | JCM19241_2714 | JCM19241_3188 | Phosphoenolpyruvate-protein phosphotransferase of PTS system. | PTS system. | 0.938 |
GAM73259.1 | GAM73734.1 | JCM19241_2714 | JCM19241_3189 | Phosphoenolpyruvate-protein phosphotransferase of PTS system. | PTS system. | 0.938 |
GAM73259.1 | GAM73735.1 | JCM19241_2714 | JCM19241_3190 | Phosphoenolpyruvate-protein phosphotransferase of PTS system. | Sucrose operon repressor scrR. | 0.886 |
GAM73259.1 | GAM73736.1 | JCM19241_2714 | JCM19241_3191 | Phosphoenolpyruvate-protein phosphotransferase of PTS system. | Sucrose operon repressor scrR. | 0.886 |
GAM73259.1 | GAM75396.1 | JCM19241_2714 | JCM19241_3308 | Phosphoenolpyruvate-protein phosphotransferase of PTS system. | Transcriptional regulator. | 0.886 |
GAM73259.1 | GAM77240.1 | JCM19241_2714 | JCM19241_1710 | Phosphoenolpyruvate-protein phosphotransferase of PTS system. | Transcriptional (co)regulator cytR. | 0.886 |
GAM73259.1 | GAM78450.1 | JCM19241_2714 | JCM19241_3788 | Phosphoenolpyruvate-protein phosphotransferase of PTS system. | Galactose operon repressor. | 0.886 |
GAM73561.1 | GAM73259.1 | JCM19241_3016 | JCM19241_2714 | Purine nucleotide synthesis repressor. | Phosphoenolpyruvate-protein phosphotransferase of PTS system. | 0.886 |
GAM73561.1 | GAM73733.1 | JCM19241_3016 | JCM19241_3188 | Purine nucleotide synthesis repressor. | PTS system. | 0.533 |
GAM73561.1 | GAM73734.1 | JCM19241_3016 | JCM19241_3189 | Purine nucleotide synthesis repressor. | PTS system. | 0.533 |
GAM73561.1 | GAM73735.1 | JCM19241_3016 | JCM19241_3190 | Purine nucleotide synthesis repressor. | Sucrose operon repressor scrR. | 0.774 |
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