STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAM75567.1Hemin ABC transporter. (66 aa)    
Predicted Functional Partners:
GAM75569.1
Manganese ABC transporter.
  
 0.993
GAM76249.1
Periplasmic hemin-binding protein.
  
 0.977
GAM75564.1
Vitamin B12 ABC transporter.
  
 0.971
GAM75565.1
Periplasmic hemin-binding protein.
  
 0.971
GAM75570.1
Cobalt ABC transporter.
  
 0.967
GAM76246.1
ABC-type hemin transport system.
  
 0.942
GAM74476.1
Ferrichrome transport ATP-binding protein fhuC.
  
 0.942
GAM74473.1
iron(III) dicitrate transport system.
  
 
 0.733
GAM75568.1
Hemin ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.709
GAM75571.1
mazG protein domain.
       0.452
Your Current Organism:
Vibrio ishigakensis
NCBI taxonomy Id: 1481914
Other names: JCM 19231, LMG 28703, LMG:28703, V. ishigakensis, Vibrio ishigakensis Gao et al. 2018, Vibrio sp. C1(2016), Vibrio sp. C212, Vibrio sp. C216, Vibrio sp. C5(2016), Vibrio sp. C64, Vibrio sp. JCM 19231, Vibrio sp. JCM 19232, Vibrio sp. JCM 19241, strain c1
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