Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAM75531.1 | GAM75532.1 | JCM19241_3443 | JCM19241_3444 | Hypothetical protein. | ATP-dependent DNA helicase recQ. | 0.732 |
GAM75531.1 | GAM75681.1 | JCM19241_3443 | JCM19241_3593 | Hypothetical protein. | Cdc6-related protein. | 0.534 |
GAM75531.1 | GAM78529.1 | JCM19241_3443 | JCM19241_1934 | Hypothetical protein. | DNA polymerase III beta subunit. | 0.804 |
GAM75531.1 | GAM78530.1 | JCM19241_3443 | JCM19241_1935 | Hypothetical protein. | DNA polymerase III beta subunit. | 0.804 |
GAM75532.1 | GAM75531.1 | JCM19241_3444 | JCM19241_3443 | ATP-dependent DNA helicase recQ. | Hypothetical protein. | 0.732 |
GAM75532.1 | GAM75681.1 | JCM19241_3444 | JCM19241_3593 | ATP-dependent DNA helicase recQ. | Cdc6-related protein. | 0.534 |
GAM75532.1 | GAM78529.1 | JCM19241_3444 | JCM19241_1934 | ATP-dependent DNA helicase recQ. | DNA polymerase III beta subunit. | 0.804 |
GAM75532.1 | GAM78530.1 | JCM19241_3444 | JCM19241_1935 | ATP-dependent DNA helicase recQ. | DNA polymerase III beta subunit. | 0.804 |
GAM75532.1 | GAM78816.1 | JCM19241_3444 | JCM19241_84 | ATP-dependent DNA helicase recQ. | ATP-dependent DNA helicase recQ. | 0.665 |
GAM75679.1 | GAM75680.1 | JCM19241_3591 | JCM19241_3592 | Cdc6-related protein. | Cdc6-related protein. | 0.603 |
GAM75679.1 | GAM75681.1 | JCM19241_3591 | JCM19241_3593 | Cdc6-related protein. | Cdc6-related protein. | 0.597 |
GAM75679.1 | GAM75682.1 | JCM19241_3591 | JCM19241_3594 | Cdc6-related protein. | Cdc6-related protein. | 0.603 |
GAM75679.1 | GAM75683.1 | JCM19241_3591 | JCM19241_3595 | Cdc6-related protein. | Potassium efflux system kefA protein. | 0.617 |
GAM75679.1 | GAM75684.1 | JCM19241_3591 | JCM19241_3596 | Cdc6-related protein. | Hypothetical protein. | 0.605 |
GAM75680.1 | GAM75679.1 | JCM19241_3592 | JCM19241_3591 | Cdc6-related protein. | Cdc6-related protein. | 0.603 |
GAM75680.1 | GAM75681.1 | JCM19241_3592 | JCM19241_3593 | Cdc6-related protein. | Cdc6-related protein. | 0.776 |
GAM75680.1 | GAM75682.1 | JCM19241_3592 | JCM19241_3594 | Cdc6-related protein. | Cdc6-related protein. | 0.773 |
GAM75680.1 | GAM75683.1 | JCM19241_3592 | JCM19241_3595 | Cdc6-related protein. | Potassium efflux system kefA protein. | 0.787 |
GAM75680.1 | GAM75684.1 | JCM19241_3592 | JCM19241_3596 | Cdc6-related protein. | Hypothetical protein. | 0.776 |
GAM75681.1 | GAM75531.1 | JCM19241_3593 | JCM19241_3443 | Cdc6-related protein. | Hypothetical protein. | 0.534 |
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