STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAM76385.1Hypothetical protein. (1268 aa)    
Predicted Functional Partners:
GAM76383.1
Alkaline phosphatase.
     0.992
GAM76386.1
Type I secretion target repeat protein.
  0.988
GAM76387.1
Alkaline phosphatase.
     0.976
GAM76384.1
Flagellar hook-length control protein fliK.
      0.918
GAM76381.1
Alkaline phosphatase.
  0.894
GAM76391.1
Flagellar hook-length control protein fliK.
     0.884
GAM76392.1
Alkaline phosphatase.
     0.883
GAM76390.1
Alkaline phosphatase.
     0.819
GAM76393.1
GAF domain protein.
 
     0.769
GAM76394.1
Membrane fusion protein.
 
 
  0.760
Your Current Organism:
Vibrio ishigakensis
NCBI taxonomy Id: 1481914
Other names: JCM 19231, LMG 28703, LMG:28703, V. ishigakensis, Vibrio ishigakensis Gao et al. 2018, Vibrio sp. C1(2016), Vibrio sp. C212, Vibrio sp. C216, Vibrio sp. C5(2016), Vibrio sp. C64, Vibrio sp. JCM 19231, Vibrio sp. JCM 19232, Vibrio sp. JCM 19241, strain c1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.