Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAM73367.1 | GAM73572.1 | JCM19241_2822 | JCM19241_3027 | Lyrosine phosphatase. | DNA-binding protein inhibitor Id-2-related protein. | 0.550 |
GAM73367.1 | GAM77841.1 | JCM19241_2822 | JCM19241_4505 | Lyrosine phosphatase. | Hypothetical protein. | 0.446 |
GAM73572.1 | GAM73367.1 | JCM19241_3027 | JCM19241_2822 | DNA-binding protein inhibitor Id-2-related protein. | Lyrosine phosphatase. | 0.550 |
GAM73572.1 | GAM75251.1 | JCM19241_3027 | JCM19241_1594 | DNA-binding protein inhibitor Id-2-related protein. | Hypothetical protein. | 0.441 |
GAM73572.1 | GAM77841.1 | JCM19241_3027 | JCM19241_4505 | DNA-binding protein inhibitor Id-2-related protein. | Hypothetical protein. | 0.605 |
GAM73572.1 | GAM78402.1 | JCM19241_3027 | JCM19241_3740 | DNA-binding protein inhibitor Id-2-related protein. | 23S rRNA (guanine-N-2-) -methyltransferase rlmG; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.718 |
GAM75251.1 | GAM73572.1 | JCM19241_1594 | JCM19241_3027 | Hypothetical protein. | DNA-binding protein inhibitor Id-2-related protein. | 0.441 |
GAM75251.1 | GAM77841.1 | JCM19241_1594 | JCM19241_4505 | Hypothetical protein. | Hypothetical protein. | 0.429 |
GAM77841.1 | GAM73367.1 | JCM19241_4505 | JCM19241_2822 | Hypothetical protein. | Lyrosine phosphatase. | 0.446 |
GAM77841.1 | GAM73572.1 | JCM19241_4505 | JCM19241_3027 | Hypothetical protein. | DNA-binding protein inhibitor Id-2-related protein. | 0.605 |
GAM77841.1 | GAM75251.1 | JCM19241_4505 | JCM19241_1594 | Hypothetical protein. | Hypothetical protein. | 0.429 |
GAM77841.1 | GAM78402.1 | JCM19241_4505 | JCM19241_3740 | Hypothetical protein. | 23S rRNA (guanine-N-2-) -methyltransferase rlmG; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.406 |
GAM77841.1 | GAM78527.1 | JCM19241_4505 | JCM19241_1932 | Hypothetical protein. | DNA recombination and repair protein recF. | 0.455 |
GAM78402.1 | GAM73572.1 | JCM19241_3740 | JCM19241_3027 | 23S rRNA (guanine-N-2-) -methyltransferase rlmG; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | DNA-binding protein inhibitor Id-2-related protein. | 0.718 |
GAM78402.1 | GAM77841.1 | JCM19241_3740 | JCM19241_4505 | 23S rRNA (guanine-N-2-) -methyltransferase rlmG; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | Hypothetical protein. | 0.406 |
GAM78527.1 | GAM77841.1 | JCM19241_1932 | JCM19241_4505 | DNA recombination and repair protein recF. | Hypothetical protein. | 0.455 |