Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAM73802.1 | GAM73803.1 | JCM19241_4998 | JCM19241_4999 | Tyrosine-protein kinase wzc. | Tyrosine-protein kinase wzc. | 0.998 |
GAM73802.1 | GAM73804.1 | JCM19241_4998 | JCM19241_5000 | Tyrosine-protein kinase wzc. | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.859 |
GAM73802.1 | GAM73805.1 | JCM19241_4998 | JCM19241_5001 | Tyrosine-protein kinase wzc. | UDP-glucose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | 0.842 |
GAM73802.1 | GAM73821.1 | JCM19241_4998 | JCM19241_5017 | Tyrosine-protein kinase wzc. | UDP-N-acetylglucosamine 4,6-dehydratase. | 0.946 |
GAM73802.1 | GAM77246.1 | JCM19241_4998 | JCM19241_1716 | Tyrosine-protein kinase wzc. | Regulator of length of O-antigen component of lipopolysaccharide chains. | 0.658 |
GAM73803.1 | GAM73802.1 | JCM19241_4999 | JCM19241_4998 | Tyrosine-protein kinase wzc. | Tyrosine-protein kinase wzc. | 0.998 |
GAM73803.1 | GAM73804.1 | JCM19241_4999 | JCM19241_5000 | Tyrosine-protein kinase wzc. | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.863 |
GAM73803.1 | GAM73805.1 | JCM19241_4999 | JCM19241_5001 | Tyrosine-protein kinase wzc. | UDP-glucose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | 0.846 |
GAM73803.1 | GAM73814.1 | JCM19241_4999 | JCM19241_5010 | Tyrosine-protein kinase wzc. | Glycosyltransferase. | 0.565 |
GAM73803.1 | GAM73821.1 | JCM19241_4999 | JCM19241_5017 | Tyrosine-protein kinase wzc. | UDP-N-acetylglucosamine 4,6-dehydratase. | 0.960 |
GAM73803.1 | GAM77246.1 | JCM19241_4999 | JCM19241_1716 | Tyrosine-protein kinase wzc. | Regulator of length of O-antigen component of lipopolysaccharide chains. | 0.658 |
GAM73804.1 | GAM73802.1 | JCM19241_5000 | JCM19241_4998 | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Tyrosine-protein kinase wzc. | 0.859 |
GAM73804.1 | GAM73803.1 | JCM19241_5000 | JCM19241_4999 | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Tyrosine-protein kinase wzc. | 0.863 |
GAM73804.1 | GAM73805.1 | JCM19241_5000 | JCM19241_5001 | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | UDP-glucose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | 0.998 |
GAM73804.1 | GAM73811.1 | JCM19241_5000 | JCM19241_5007 | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Putatve zinc-binding dehydrogenase. | 0.930 |
GAM73804.1 | GAM73812.1 | JCM19241_5000 | JCM19241_5008 | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Putatve zinc-binding dehydrogenase. | 0.933 |
GAM73804.1 | GAM73814.1 | JCM19241_5000 | JCM19241_5010 | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Glycosyltransferase. | 0.907 |
GAM73804.1 | GAM73821.1 | JCM19241_5000 | JCM19241_5017 | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | UDP-N-acetylglucosamine 4,6-dehydratase. | 0.821 |
GAM73804.1 | GAM73840.1 | JCM19241_5000 | JCM19241_5036 | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | dTDP-glucose 4,6-dehydratase. | 0.869 |
GAM73804.1 | GAM77246.1 | JCM19241_5000 | JCM19241_1716 | UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Regulator of length of O-antigen component of lipopolysaccharide chains. | 0.797 |
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