Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAM74120.1 | GAM74121.1 | JCM19241_5316 | JCM19241_5317 | 2-amino-3-ketobutyrate coenzyme A ligase. | 2-amino-3-ketobutyrate coenzyme A ligase. | 0.994 |
GAM74120.1 | GAM75793.1 | JCM19241_5316 | JCM19241_3705 | 2-amino-3-ketobutyrate coenzyme A ligase. | Sensory box histidine kinase. | 0.765 |
GAM74120.1 | GAM75795.1 | JCM19241_5316 | JCM19241_3707 | 2-amino-3-ketobutyrate coenzyme A ligase. | Diguanylate cyclase. | 0.765 |
GAM74120.1 | GAM75797.1 | JCM19241_5316 | JCM19241_3709 | 2-amino-3-ketobutyrate coenzyme A ligase. | Sensory box histidine kinase. | 0.765 |
GAM74120.1 | GAM75801.1 | JCM19241_5316 | JCM19241_3713 | 2-amino-3-ketobutyrate coenzyme A ligase. | Sensory box histidine kinase. | 0.748 |
GAM74120.1 | GAM75802.1 | JCM19241_5316 | JCM19241_3714 | 2-amino-3-ketobutyrate coenzyme A ligase. | Adenylate cyclase. | 0.744 |
GAM74120.1 | bioC | JCM19241_5316 | JCM19241_2998 | 2-amino-3-ketobutyrate coenzyme A ligase. | Biotin synthesis protein bioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. | 0.810 |
GAM74120.1 | bioD | JCM19241_5316 | JCM19241_2999 | 2-amino-3-ketobutyrate coenzyme A ligase. | Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.886 |
GAM74120.1 | bioH | JCM19241_5316 | JCM19241_1756 | 2-amino-3-ketobutyrate coenzyme A ligase. | Biotin synthesis protein bioH; The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters. | 0.742 |
GAM74120.1 | tdh | JCM19241_5316 | JCM19241_5318 | 2-amino-3-ketobutyrate coenzyme A ligase. | L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.984 |
GAM74121.1 | GAM74120.1 | JCM19241_5317 | JCM19241_5316 | 2-amino-3-ketobutyrate coenzyme A ligase. | 2-amino-3-ketobutyrate coenzyme A ligase. | 0.994 |
GAM74121.1 | GAM75793.1 | JCM19241_5317 | JCM19241_3705 | 2-amino-3-ketobutyrate coenzyme A ligase. | Sensory box histidine kinase. | 0.765 |
GAM74121.1 | GAM75795.1 | JCM19241_5317 | JCM19241_3707 | 2-amino-3-ketobutyrate coenzyme A ligase. | Diguanylate cyclase. | 0.765 |
GAM74121.1 | GAM75797.1 | JCM19241_5317 | JCM19241_3709 | 2-amino-3-ketobutyrate coenzyme A ligase. | Sensory box histidine kinase. | 0.765 |
GAM74121.1 | GAM75801.1 | JCM19241_5317 | JCM19241_3713 | 2-amino-3-ketobutyrate coenzyme A ligase. | Sensory box histidine kinase. | 0.748 |
GAM74121.1 | GAM75802.1 | JCM19241_5317 | JCM19241_3714 | 2-amino-3-ketobutyrate coenzyme A ligase. | Adenylate cyclase. | 0.744 |
GAM74121.1 | bioC | JCM19241_5317 | JCM19241_2998 | 2-amino-3-ketobutyrate coenzyme A ligase. | Biotin synthesis protein bioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. | 0.810 |
GAM74121.1 | bioD | JCM19241_5317 | JCM19241_2999 | 2-amino-3-ketobutyrate coenzyme A ligase. | Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.845 |
GAM74121.1 | bioH | JCM19241_5317 | JCM19241_1756 | 2-amino-3-ketobutyrate coenzyme A ligase. | Biotin synthesis protein bioH; The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters. | 0.742 |
GAM74121.1 | tdh | JCM19241_5317 | JCM19241_5318 | 2-amino-3-ketobutyrate coenzyme A ligase. | L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.984 |
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