STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAM74221.1Dipeptide transport system permease protein dppC. (155 aa)    
Predicted Functional Partners:
GAM74220.1
Dipeptide transport system permease protein dppB.
 
 
 0.969
GAM74219.1
Dipeptide-binding ABC transporter.
 
  0.929
GAM74218.1
Dipeptide-binding ABC transporter.
 
  0.907
GAM75429.1
Dipeptide transport system permease protein dppB.
  
 
 0.872
GAM74421.1
Dipeptide transport system permease protein dppC.
  
 
  0.868
GAM75263.1
Dipeptide transport system permease protein dppB.
  
 
 0.865
GAM75428.1
Dipeptide-binding ABC transporter.
  
  0.865
GAM78083.1
ABC transporter.
  
 
 0.856
GAM75430.1
Dipeptide transport system permease protein dppB.
  
 
 0.852
GAM74217.1
Oligopeptide transport ATP-binding protein oppF.
 
 
 0.849
Your Current Organism:
Vibrio ishigakensis
NCBI taxonomy Id: 1481914
Other names: JCM 19231, LMG 28703, LMG:28703, V. ishigakensis, Vibrio ishigakensis Gao et al. 2018, Vibrio sp. C1(2016), Vibrio sp. C212, Vibrio sp. C216, Vibrio sp. C5(2016), Vibrio sp. C64, Vibrio sp. JCM 19231, Vibrio sp. JCM 19232, Vibrio sp. JCM 19241, strain c1
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