STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001310675_00473Unannotated protein. (111 aa)    
Predicted Functional Partners:
GCA_001310675_00472
Unannotated protein.
     0.984
GCA_001310675_07100
Unannotated protein.
  
 
 0.759
GCA_001310675_01651
Unannotated protein.
  
     0.661
GCA_001310675_01700
Unannotated protein.
 
    0.658
GCA_001310675_00474
Unannotated protein.
  
    0.654
GCA_001310675_01998
Unannotated protein.
 
  
  0.631
GCA_001310675_00483
Unannotated protein.
  
 
 0.628
GCA_001310675_00484
Unannotated protein.
  
 
 0.628
GCA_001310675_07193
Unannotated protein.
  
 
 0.625
GCA_001310675_01999
Unannotated protein.
    
  0.592
Your Current Organism:
Oceanobacillus sp. JCM19060
NCBI taxonomy Id: 1481930
Other names: O. sp. JCM 19060, Oceanobacillus sp. JCM 19060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.