STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001310675_00608Unannotated protein. (199 aa)    
Predicted Functional Partners:
GCA_001310675_00606
Unannotated protein.
 
     0.946
GCA_001310675_00607
Unannotated protein.
 
     0.842
GCA_001310675_01749
Unannotated protein.
  
     0.626
GCA_001310675_04473
Unannotated protein.
  
  
 0.606
GCA_001310675_06279
Unannotated protein.
  
     0.534
GCA_001310675_06280
Unannotated protein.
  
     0.533
GCA_001310675_06338
Unannotated protein.
  
     0.512
GCA_001310675_06923
Unannotated protein.
  
     0.509
GCA_001310675_03372
Unannotated protein.
  
    0.486
GCA_001310675_00556
Unannotated protein.
  
     0.434
Your Current Organism:
Oceanobacillus sp. JCM19060
NCBI taxonomy Id: 1481930
Other names: O. sp. JCM 19060, Oceanobacillus sp. JCM 19060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.