close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APC47470.1Derived by automated computational analysis using gene prediction method: Protein Homology. (559 aa)    
Predicted Functional Partners:
APC48751.1
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.999
APC47469.1
Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
APC48446.1
Cytochrome C oxidase Cbb3; Component of the menaquinol-cytochrome c reductase complex.
 
 0.997
APC48477.1
Cytochrome B5; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
APC48749.1
Cytochrome (ubi)quinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
APC48748.1
Cytochrome c oxidase subunit IVB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.993
APC49287.1
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.987
APC49288.1
Cytochrome aa3 quinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.936
APC47195.1
Cytochrome aa3 quinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.927
APC48445.1
Cytochrome b6; Electron transport protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.927
Your Current Organism:
Virgibacillus halodenitrificans
NCBI taxonomy Id: 1482
Other names: ATCC 49067, Bacillus halodenitrificans, DSM 10037, JCM 12304, LMG 9818, LMG:9818, NBRC 102361, V. halodenitrificans
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.