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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APC47931.1Gas vesicle protein GvpR; Derived by automated computational analysis using gene prediction method: Protein Homology. (86 aa)    
Predicted Functional Partners:
APC47932.1
Gas vesicle protein GvpN; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.723
APC47933.1
Gas vesicle protein GvpF; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.665
APC47934.1
Gas vesicle protein GvpG; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.665
APC47935.1
Gas vesicle protein GvpL; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.665
APC47936.1
Gas vesicle protein GvpS; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
       0.654
APC47937.1
Gas vesicle protein K; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.654
gvpA
Gas vesicle protein GvpA; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
       0.609
APC47929.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
APC47928.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.532
APC47938.1
Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
       0.527
Your Current Organism:
Virgibacillus halodenitrificans
NCBI taxonomy Id: 1482
Other names: ATCC 49067, Bacillus halodenitrificans, DSM 10037, JCM 12304, LMG 9818, LMG:9818, NBRC 102361, V. halodenitrificans
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