Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OAR03204.1Stage V sporulation protein AF; Derived by automated computational analysis using gene prediction method: Protein Homology. (491 aa)    
Predicted Functional Partners:
OAR03205.1
RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
     0.927
OAR03403.1
Stage V sporulation protein AD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.925
spoIIAB
Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
 
   
 0.919
OAR03404.1
Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.914
OAR03402.1
Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.909
OAR03207.1
Anti-sigma F factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
 
   
 0.810
OAR04102.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.799
SA87_11130
Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.798
gpr
Hypothetical protein; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.797
OAR03942.1
Spore coat protein GerQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.795
Your Current Organism:
Hydrogenibacillus schlegelii
NCBI taxonomy Id: 1484
Other names: ATCC 43741, Bacillus schlegelii, CCUG 26017, CIP 106933, DSM 2000, H. schlegelii, LMG 7133, LMG:7133, strain MA 48
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