Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SA87_07925NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (455 aa)    
Predicted Functional Partners:
OAR03754.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.929
OAR04380.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.875
OAR05469.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.850
OAR03352.1
Nitrogen fixation protein NifU; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.806
OAR04879.1
Amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.744
OAR05510.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.744
OAR04523.1
Sulfite reductase; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 0.716
OAR03862.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.693
OAR04292.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.639
OAR03818.1
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.639
Your Current Organism:
Hydrogenibacillus schlegelii
NCBI taxonomy Id: 1484
Other names: ATCC 43741, Bacillus schlegelii, CCUG 26017, CIP 106933, DSM 2000, H. schlegelii, LMG 7133, LMG:7133, strain MA 48
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