Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OAR05320.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)    
Predicted Functional Partners:
OAR05321.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.994
OAR05319.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.988
paaA
AAA family ATPase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.952
OAR05329.1
phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.948
OAR05348.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.914
OAR05322.1
PaaX family transcrtiptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.888
OAR05323.1
Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.802
OAR05331.1
Ethyl tert-butyl ether degradation protein EthD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.788
OAR03953.1
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.697
OAR03991.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.697
Your Current Organism:
Hydrogenibacillus schlegelii
NCBI taxonomy Id: 1484
Other names: ATCC 43741, Bacillus schlegelii, CCUG 26017, CIP 106933, DSM 2000, H. schlegelii, LMG 7133, LMG:7133, strain MA 48
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