Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OAR03590.1 | OAR03591.1 | SA87_02870 | SA87_02875 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.995 |
| OAR03590.1 | OAR04698.1 | SA87_02870 | SA87_09255 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.929 |
| OAR03590.1 | OAR04699.1 | SA87_02870 | SA87_09260 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar motor switch protein FliG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.969 |
| OAR03590.1 | OAR05154.1 | SA87_02870 | SA87_08375 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.996 |
| OAR03590.1 | OAR05159.1 | SA87_02870 | SA87_08400 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.996 |
| OAR03590.1 | csrA | SA87_02870 | SA87_08390 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.800 |
| OAR03590.1 | flgK | SA87_02870 | SA87_08370 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.994 |
| OAR03590.1 | fliW | SA87_02870 | SA87_08385 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.924 |
| OAR03591.1 | OAR03590.1 | SA87_02875 | SA87_02870 | Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.995 |
| OAR03591.1 | OAR04698.1 | SA87_02875 | SA87_09255 | Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Hypothetical protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.942 |
| OAR03591.1 | OAR04699.1 | SA87_02875 | SA87_09260 | Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar motor switch protein FliG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.946 |
| OAR03591.1 | OAR05154.1 | SA87_02875 | SA87_08375 | Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.964 |
| OAR03591.1 | OAR05155.1 | SA87_02875 | SA87_08380 | Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.704 |
| OAR03591.1 | OAR05159.1 | SA87_02875 | SA87_08400 | Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.961 |
| OAR03591.1 | csrA | SA87_02875 | SA87_08390 | Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Hypothetical protein; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.687 |
| OAR03591.1 | flgK | SA87_02875 | SA87_08370 | Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.976 |
| OAR03591.1 | fliW | SA87_02875 | SA87_08385 | Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Hypothetical protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.895 |
| OAR04698.1 | OAR03590.1 | SA87_09255 | SA87_02870 | Hypothetical protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.929 |
| OAR04698.1 | OAR03591.1 | SA87_09255 | SA87_02875 | Hypothetical protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.942 |
| OAR04698.1 | OAR04699.1 | SA87_09255 | SA87_09260 | Hypothetical protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar motor switch protein FliG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
page 1 of 5