Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
OAR04610.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)    
Predicted Functional Partners:
OAR04611.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.985
OAR04612.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.960
OAR04019.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.701
OAR04650.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.701
OAR04652.1
Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.701
OAR04893.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.701
OAR04613.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.490
OAR04614.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.488
OAR04615.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.488
Your Current Organism:
Hydrogenibacillus schlegelii
NCBI taxonomy Id: 1484
Other names: ATCC 43741, Bacillus schlegelii, CCUG 26017, CIP 106933, DSM 2000, H. schlegelii, LMG 7133, LMG:7133, strain MA 48
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