STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF64789.1Predicted dehydrogenase. (347 aa)    
Predicted Functional Partners:
SHE70067.1
UDP-N-acetyl-D-glucosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
  0.808
SHF45177.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
  0.793
SHF64737.1
Dienelactone hydrolase family protein.
 
     0.748
SHF20533.1
Tat (twin-arginine translocation) pathway signal sequence.
  
     0.730
SHF43314.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
  0.722
SHF64765.1
Hypothetical protein.
       0.718
SHF89843.1
Predicted dehydrogenase.
  
     0.691
SHE54725.1
Predicted dehydrogenase.
  
     0.664
SHE53335.1
Predicted dehydrogenase.
  
     0.631
SHF96411.1
Predicted dehydrogenase.
  
     0.622
Your Current Organism:
Mariniphaga anaerophila
NCBI taxonomy Id: 1484053
Other names: Bacteroidales bacterium Fu11-5, DSM 26910, JCM 18693, M. anaerophila, Mariniphaga anaerophila Iino et al. 2014, NBRC 109408, strain Fu11-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.