Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHE68231.1 | SHF22131.1 | SAMN05444274_10298 | SAMN05444274_10491 | Shikimate dehydrogenase. | Aminodeoxychorismate synthase, subunit I. | 0.663 |
| SHE68231.1 | SHF57886.1 | SAMN05444274_10298 | SAMN05444274_106253 | Shikimate dehydrogenase. | Anthranilate synthase, component II. | 0.841 |
| SHE68231.1 | mltG | SAMN05444274_10298 | SAMN05444274_11056 | Shikimate dehydrogenase. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.466 |
| SHF07100.1 | SHF95645.1 | SAMN05444274_103407 | SAMN05444274_11516 | Penicillin-binding protein 1A. | Rod shape-determining protein MreC. | 0.548 |
| SHF07100.1 | ftsA | SAMN05444274_103407 | SAMN05444274_104241 | Penicillin-binding protein 1A. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.540 |
| SHF07100.1 | mltG | SAMN05444274_103407 | SAMN05444274_11056 | Penicillin-binding protein 1A. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.624 |
| SHF07100.1 | murG | SAMN05444274_103407 | SAMN05444274_104244 | Penicillin-binding protein 1A. | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.456 |
| SHF22131.1 | SHE68231.1 | SAMN05444274_10491 | SAMN05444274_10298 | Aminodeoxychorismate synthase, subunit I. | Shikimate dehydrogenase. | 0.663 |
| SHF22131.1 | SHF57886.1 | SAMN05444274_10491 | SAMN05444274_106253 | Aminodeoxychorismate synthase, subunit I. | Anthranilate synthase, component II. | 0.998 |
| SHF22131.1 | mltG | SAMN05444274_10491 | SAMN05444274_11056 | Aminodeoxychorismate synthase, subunit I. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.521 |
| SHF57886.1 | SHE68231.1 | SAMN05444274_106253 | SAMN05444274_10298 | Anthranilate synthase, component II. | Shikimate dehydrogenase. | 0.841 |
| SHF57886.1 | SHF22131.1 | SAMN05444274_106253 | SAMN05444274_10491 | Anthranilate synthase, component II. | Aminodeoxychorismate synthase, subunit I. | 0.998 |
| SHF57886.1 | mltG | SAMN05444274_106253 | SAMN05444274_11056 | Anthranilate synthase, component II. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.500 |
| SHF83500.1 | mltG | SAMN05444274_11055 | SAMN05444274_11056 | Sialate O-acetylesterase. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.551 |
| SHF83556.1 | mltG | SAMN05444274_11057 | SAMN05444274_11056 | Flavorubredoxin. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.539 |
| SHF94406.1 | SHF95645.1 | SAMN05444274_11445 | SAMN05444274_11516 | Penicillin-binding protein 1A. | Rod shape-determining protein MreC. | 0.589 |
| SHF94406.1 | ftsA | SAMN05444274_11445 | SAMN05444274_104241 | Penicillin-binding protein 1A. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.410 |
| SHF94406.1 | mltG | SAMN05444274_11445 | SAMN05444274_11056 | Penicillin-binding protein 1A. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.533 |
| SHF95645.1 | SHF07100.1 | SAMN05444274_11516 | SAMN05444274_103407 | Rod shape-determining protein MreC. | Penicillin-binding protein 1A. | 0.548 |
| SHF95645.1 | SHF94406.1 | SAMN05444274_11516 | SAMN05444274_11445 | Rod shape-determining protein MreC. | Penicillin-binding protein 1A. | 0.589 |
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