STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMJ64485.1Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)    
Predicted Functional Partners:
AMJ64486.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.888
AMJ64135.1
Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.675
AMJ64986.1
Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.572
AMJ64484.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.550
AMJ64483.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.543
AMJ67546.1
Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.535
Your Current Organism:
Hymenobacter sp. PAMC26628
NCBI taxonomy Id: 1484118
Other names: H. sp. PAMC 26628, Hymenobacter sp. PAMC 26628
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