STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIX74624.1NADH:flavorubredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)    
Predicted Functional Partners:
AIX74623.1
Detoxifies nitric oxide using NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.990
AIX73927.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.934
AIX75686.1
30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.796
AIX74757.1
Cytochrome C554; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.788
AIX72615.1
Naphthalene 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.771
AIX73899.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.753
AIX75874.1
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.749
nirD
Involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+; bounds to NirB, the cytoplasmic subunit, whose expression is induced at high nitrate concentrations; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.739
AIX74625.1
With TehA confers resistance to tellurite; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.737
AIX72735.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.725
Your Current Organism:
Pantoea sp. PSNIH2
NCBI taxonomy Id: 1484157
Other names: P. sp. PSNIH2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.