STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000797465_02258Unannotated protein. (296 aa)    
Predicted Functional Partners:
GCA_000797465_02257
Unannotated protein.
  
    0.786
GCA_000797465_01707
Unannotated protein.
 
  
 0.654
GCA_000797465_00492
Unannotated protein.
  
   
 0.603
GCA_000797465_01714
Unannotated protein.
     
 0.577
GCA_000797465_02259
Unannotated protein.
       0.577
GCA_000797465_03010
Unannotated protein.
     
 0.576
GCA_000797465_00057
Unannotated protein.
     
 0.573
GCA_000797465_01275
Unannotated protein.
    
 0.569
GCA_000797465_00538
Unannotated protein.
    
  0.566
GCA_000797465_02172
Unannotated protein.
    
  0.566
Your Current Organism:
Psychroserpens jangbogonensis
NCBI taxonomy Id: 1484460
Other names: JCM 30228, KCTC 42128, P. jangbogonensis, PAMC 27130, Psychroserpens jangbogonensis Baek et al. 2015, Psychroserpens sp. PAMC 27130
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.