STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1B653MADS-box domain-containing protein. (102 aa)    
Predicted Functional Partners:
A0A2V1CKJ7
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.816
A0A2V1C8F1
zf-RING-like domain-containing protein.
    
 0.812
A0A2V1CH23
Uncharacterized protein.
    
 0.792
A0A2V1CGS2
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.672
A0A2V1CH93
Periplasmic binding protein-like II.
    
 0.672
A0A2V1C7V2
Structural maintenance of chromosomes protein.
    
 0.622
A0A2V1CHD0
Uncharacterized protein.
    
 0.600
A0A2V1BDH5
Uncharacterized protein.
    
 0.596
A0A2V1BEK2
Uncharacterized protein.
    
 0.596
A0A2V1CPN8
Zn(2)-C6 fungal-type domain-containing protein.
    
 0.596
Your Current Organism:
Cadophora sp. DSE1049
NCBI taxonomy Id: 1485229
Other names: C. sp. DSE1049
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