STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1BVS1Ubiquitin-conjugating enzyme. (155 aa)    
Predicted Functional Partners:
A0A2V1CQ46
Ubiquitin-protein ligase-like protein Ufd4.
   
 0.966
A0A2V1CDA4
Ubiquitin-activating enzyme E1; Belongs to the ubiquitin-activating E1 family.
   
 0.952
A0A2V1CIK9
E3 ubiquitin-protein ligase RBX1.
    
 0.919
A0A2V1CC50
Ubiquitin-conjugating enzyme.
   
 0.913
A0A2V1CI12
Ubiquitin-like protein.
   
 0.886
A0A2V1CAW9
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.885
A0A2V1CT96
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
0.885
A0A2V1BGC6
Cysteine proteinase.
    
 0.856
A0A2V1CKD1
RRN7-type domain-containing protein.
   
 0.841
A0A2V1CQW2
Uncharacterized protein.
   
 0.841
Your Current Organism:
Cadophora sp. DSE1049
NCBI taxonomy Id: 1485229
Other names: C. sp. DSE1049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.