STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1CJW4Uncharacterized protein. (1061 aa)    
Predicted Functional Partners:
A0A2V1BWX5
Spindle pole body component.
    
 0.800
A0A2V1CJR4
CDC45-like protein.
   
 
  0.729
A0A2V1CCV6
Spindle pole body component.
    
 0.716
A0A2V1CGD9
DBF4-type domain-containing protein.
   
 
  0.714
A0A2V1BG33
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.678
A0A2V1CAE0
Spindle pole body component.
    
 0.630
A0A2V1CFY1
Spindle pole body component.
    
 0.630
A0A2V1CJR2
Uncharacterized protein.
    
 0.630
A0A2V1BHI2
ClpP/crotonase.
   
 0.606
A0A2V1BLL6
ClpP/crotonase.
   
 0.606
Your Current Organism:
Cadophora sp. DSE1049
NCBI taxonomy Id: 1485229
Other names: C. sp. DSE1049
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