STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1CWB1Polyubiquitin. (305 aa)    
Predicted Functional Partners:
A0A2V1CAW9
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.983
A0A2V1CT96
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.983
A0A2V1CQ46
Ubiquitin-protein ligase-like protein Ufd4.
   
 0.966
A0A2V1BSA9
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.958
A0A2V1CV70
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.955
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.954
A0A2V1C1G1
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.954
A0A2V1BDQ4
60S ribosomal protein L21.
   
 0.952
A0A2V1CJ41
60S ribosomal protein L25.
   
 0.950
A0A2V1CTR5
60S ribosomal protein L24a.
   
  0.950
Your Current Organism:
Cadophora sp. DSE1049
NCBI taxonomy Id: 1485229
Other names: C. sp. DSE1049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.