STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744415_01374Unannotated protein. (377 aa)    
Predicted Functional Partners:
GCA_000744415_01375
Unannotated protein.
 
 0.999
GCA_000744415_01376
Unannotated protein.
 0.999
GCA_000744415_01377
Unannotated protein.
       0.712
GCA_000744415_00576
Unannotated protein.
     
 0.668
GCA_000744415_00875
Unannotated protein.
     
 0.624
GCA_000744415_02132
Unannotated protein.
     
 0.596
GCA_000744415_01373
Unannotated protein.
       0.526
GCA_000744415_00078
Unannotated protein.
   
    0.509
GCA_000744415_00004
Unannotated protein.
   
  
 0.439
GCA_000744415_01121
Unannotated protein.
     
 0.439
Your Current Organism:
Ghiorsea bivora
NCBI taxonomy Id: 1485545
Other names: DSM 103937, G. bivora, JCM 31637, NCMA B5, Zetaproteobacteria bacterium TAG-1, strain TAG-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.