STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744415_01459Unannotated protein. (248 aa)    
Predicted Functional Partners:
GCA_000744415_01458
Unannotated protein.
       0.642
GCA_000744415_02111
Unannotated protein.
  
  
  0.486
GCA_000744415_01460
Unannotated protein.
       0.461
GCA_000744415_01456
Unannotated protein.
       0.456
GCA_000744415_01457
Unannotated protein.
       0.456
GCA_000744415_01033
Unannotated protein.
  
     0.416
Your Current Organism:
Ghiorsea bivora
NCBI taxonomy Id: 1485545
Other names: DSM 103937, G. bivora, JCM 31637, NCMA B5, Zetaproteobacteria bacterium TAG-1, strain TAG-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.