STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744415_02016Unannotated protein. (467 aa)    
Predicted Functional Partners:
GCA_000744415_00391
Unannotated protein.
 
 
 0.956
GCA_000744415_02058
Unannotated protein.
    
 
 0.935
GCA_000744415_02018
Unannotated protein.
 
   
 0.892
GCA_000744415_01971
Unannotated protein.
 
  
  0.891
GCA_000744415_00286
Unannotated protein.
  
 
 0.819
GCA_000744415_01509
Unannotated protein.
    
 0.802
GCA_000744415_02019
Unannotated protein.
 
     0.764
GCA_000744415_02017
Unannotated protein.
 
   
 0.723
GCA_000744415_02015
Unannotated protein.
 
   
 0.690
GCA_000744415_00835
Unannotated protein.
     
 0.591
Your Current Organism:
Ghiorsea bivora
NCBI taxonomy Id: 1485545
Other names: DSM 103937, G. bivora, JCM 31637, NCMA B5, Zetaproteobacteria bacterium TAG-1, strain TAG-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.