STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APX99559.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)    
Predicted Functional Partners:
APY01216.1
Na(+)-translocating NADH-quinone reductase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.629
APX99558.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.613
APX99652.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.559
APX99560.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.510
APY00652.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.508
APX99768.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.479
APX99570.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.454
APX99557.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.426
APX99656.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.425
Your Current Organism:
Lacinutrix venerupis
NCBI taxonomy Id: 1486034
Other names: CECT 8573, DSM 28755, L. venerupis, Lacinutrix sp. Cmf 20.8, Lacinutrix venerupis Lasa et al. 2016, strain Cmf 20.8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.