STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJY46333.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (377 aa)    
Predicted Functional Partners:
AJY45473.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.872
AJY45255.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.870
AJY44636.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.868
AJY45472.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.868
AJY45256.1
Mannitol ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.867
AJY44635.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.865
AJY47844.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.834
AJY45254.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.834
AJY45475.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.834
AJY46336.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.691
Your Current Organism:
Martelella endophytica
NCBI taxonomy Id: 1486262
Other names: KCCM 43011, M. endophytica, Martelella endophytica Bibi et al. 2013, NBRC 109149, strain YC6887
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