STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HY00_08260Redox-active disulfide protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (79 aa)    
Predicted Functional Partners:
HY00_02945
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.960
HY00_03315
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.960
HY00_03695
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.958
HY00_08045
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.958
HY00_06125
Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.947
HY00_08265
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.916
nusA
Transcription elongation factor NusA; Participates in both transcription termination and antitermination.
    
   0.872
dnaJ
Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]
    
 0.871
dnaJ-2
Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]
    
 0.871
HY00_01070
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.808
Your Current Organism:
Peptococcaceae bacterium SCADC123
NCBI taxonomy Id: 1487582
Other names: P. bacterium SCADC1_2_3, Peptococcaceae bacterium SCADC1, Peptococcaceae bacterium SCADC1_2_3, Peptococcaceae bacterium SCADC2, Peptococcaceae bacterium SCADC3
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