STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP68_01460Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)    
Predicted Functional Partners:
DP68_12920
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.480
DP68_01445
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.429
DP68_01450
Phosphoenolpyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.429
DP68_01455
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.429
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.416
DP68_08060
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.413
Your Current Organism:
Clostridium sp. HMP27
NCBI taxonomy Id: 1487921
Other names: C. sp. HMP27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.