STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000733415_00645Unannotated protein. (411 aa)    
Predicted Functional Partners:
GCA_000733415_00427
Unannotated protein.
    
 0.966
GCA_000733415_01273
Unannotated protein.
    
 
 0.662
GCA_000733415_05772
Unannotated protein.
    
 
 0.662
GCA_000733415_01176
Unannotated protein.
  
 
 0.591
GCA_000733415_03529
Unannotated protein.
  
 
0.591
GCA_000733415_05288
Unannotated protein.
  
 
 0.591
GCA_000733415_00644
Unannotated protein.
       0.542
GCA_000733415_03311
Unannotated protein.
    
 0.531
GCA_000733415_04843
Unannotated protein.
  
  
 0.479
GCA_000733415_01122
Unannotated protein.
    
 0.458
Your Current Organism:
Leptolyngbya sp. JSC1
NCBI taxonomy Id: 1487953
Other names: Leptolyngbya sp. JSC-1, Marsacia ferruginose ATCC BAA-2121, Oscillatoriales cyanobacterium JSC-1, [. sp. JSC-1, [Leptolyngbya] sp. JSC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.