STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000733415_01804Unannotated protein. (306 aa)    
Predicted Functional Partners:
GCA_000733415_00495
Unannotated protein.
     
 0.853
GCA_000733415_03447
Unannotated protein.
     
 0.853
GCA_000733415_01472
Unannotated protein.
     
 0.733
GCA_000733415_00030
Unannotated protein.
    
  0.715
GCA_000733415_03269
Unannotated protein.
     
 0.672
GCA_000733415_03016
Unannotated protein.
     
 0.651
GCA_000733415_02162
Unannotated protein.
     
 0.634
GCA_000733415_01133
Unannotated protein.
    
  0.629
GCA_000733415_00498
Unannotated protein.
     
 0.627
GCA_000733415_03738
Unannotated protein.
     
 0.619
Your Current Organism:
Leptolyngbya sp. JSC1
NCBI taxonomy Id: 1487953
Other names: Leptolyngbya sp. JSC-1, Marsacia ferruginose ATCC BAA-2121, Oscillatoriales cyanobacterium JSC-1, [. sp. JSC-1, [Leptolyngbya] sp. JSC-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.